Package: maPredictDSC 1.50.0

Adi Laurentiu Tarca

maPredictDSC: Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge

This package implements the classification pipeline of the best overall team (Team221) in the IMPROVER Diagnostic Signature Challenge. Additional functionality is added to compare 27 combinations of data preprocessing, feature selection and classifier types.

Authors:Adi Laurentiu Tarca <[email protected]>

maPredictDSC_1.50.0.tar.gz
maPredictDSC_1.50.0.zip(r-4.7)maPredictDSC_1.50.0.zip(r-4.6)maPredictDSC_1.50.0.zip(r-4.5)
maPredictDSC_1.50.0.tgz(r-4.6-any)maPredictDSC_1.50.0.tgz(r-4.5-any)
maPredictDSC_1.50.0.tar.gz(r-4.7-any)maPredictDSC_1.50.0.tar.gz(r-4.6-any)
maPredictDSC_1.50.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
maPredictDSC/json (API)

# Install 'maPredictDSC' in R:
install.packages('maPredictDSC', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:maPredictDSC-1.51.0(bioc 3.24)maPredictDSC-1.50.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayclassification

3.30 score 2 scripts 1 mentions 3 exports 120 dependencies

Last updated from:77f4c23250 (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR199
linux-devel-x86_64NOTE372
source / vignettesOK342
linux-release-x86_64NOTE362
macos-release-arm64NOTE204
macos-oldrel-arm64NOTE222
windows-develNOTE331
windows-releaseNOTE348
windows-oldrelNOTE355
wasm-releaseOK173

Exports:aggregateDSCperfDSCpredictDSC

Dependencies:affyaffyioAnnotationDbiaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64bitopsblobcachemcaretcaToolsclasscliclockcodetoolscpp11crayoncurldata.tableDBIdiagramdigestdplyre1071evaluatefarverfastmapforeachfuturefuture.applygcrmagenericsggplot2globalsgluegowergplotsgtablegtoolshardhathgu133plus2.dbhighrhttripredIRangesisobanditeratorsjsonliteKEGGRESTKernSmoothknitrlabelinglatticelavalifecyclelimmalistenvlubridateLungCancerACvsSCCGEOmagrittrMASSMatrixmemoisemimeModelMetricsnlmennetnumDerivopensslorg.Hs.eg.dbparallellypillarpkgconfigplyrpngpreprocessCorepROCprodlimprogressrproxypurrrR6RColorBrewerRcpprecipesreshape2rlangROCROCRrpartRSQLiteS4VectorsS7scalesSeqinfoshapesparsevctrsSQUAREMstatmodstringistringrsurvivalsystibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithrxfunXVectoryaml

maPredictDSC

Rendered frommaPredictDSC.Rnwusingutils::Sweaveon Jun 19 2026.

Last update: 2013-11-01
Started: 2013-11-01