Package: minionSummaryData 1.42.0

Mike Smith

minionSummaryData: Summarised MinION sequencing data published by Ashton et al. 2015

Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.

Authors:Mike Smith [aut, cre]

minionSummaryData_1.42.0.tar.gz
minionSummaryData_1.42.0.tar.gz(r-4.7-any)minionSummaryData_1.42.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
minionSummaryData/json (API)

# Install 'minionSummaryData' in R:

install.packages('minionSummaryData', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

s.typhi.rep1 - Summarised MinION sequencing data published by Ashton et al. [2015]
s.typhi.rep2 - Summarised MinION sequencing data published by Ashton et al. [2015]
s.typhi.rep3 - Summarised MinION sequencing data published by Ashton et al. [2015]

On BioConductor:minionSummaryData-1.43.0(data/experiment 3.24)minionSummaryData-1.42.0(data/experiment 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

experimentdata sequencingdata datapkg

3.30 score 2 scripts 0 exports 0 dependencies

Last updated from:8ad3cb01ff (on RELEASE_3_23). Checks:3 WARNING, 1 OK. Indexed: no.

This is a data package. Data packages may be large and do not get checked across all platforms.

Target	Result	Time
bioc-checks	WARNING	131
linux-devel	WARNING	677
source / vignettes	OK	655
linux-release	WARNING	641

Exports:

Dependencies:

Creating example MinION summary dataset

Introduction | Data processing | References

Rendered fromcreating-Styphi-Dataset.Rmdusingknitr::rmarkdown

Last update: 2015-08-19
Started: 2015-06-17

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Summarised MinION sequencing data published by Ashton et al. [2015]	s.typhi.rep1 s.typhi.rep2 s.typhi.rep3