# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "nanotubes" in publications use:'
type: software
license: GPL-3.0-only
title: 'nanotubes: Mouse nanotube CAGE data'
version: 1.28.0
doi: 10.1021/acsnano.6b07533
identifiers:
- type: doi
  value: 10.32614/CRAN.package.nanotubes
abstract: Cap Analysis of Gene Expression (CAGE) data from "Identification of Gene
  Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube
  Exposure in Vivo" by Bornholdt et al. supplied as CAGE Transcription Start Sites
  (CTSSs).
authors:
- family-names: Thodberg
  given-names: Malte
  email: maltethodberg@gmail.com
preferred-citation:
  type: article
  title: Identification of Gene Transcription Start Sites and Enhancers Responding
    to Pulmonary Carbon Nanotube Exposure in Vivo
  authors:
  - family-names: Bornholdt
    given-names: Jette
  - family-names: Saber
    given-names: Anne Thoustrup
  - family-names: Lilje
    given-names: Berit
  - family-names: Boyd
    given-names: Mette
  - family-names: Jørgensen
    given-names: Mette
  - family-names: Chen
    given-names: Yun
  - family-names: Vitezic
    given-names: Morana
  - family-names: Jacobsen
    given-names: Nicklas Raun
  - family-names: Poulsen
    given-names: Sarah Søs
  - family-names: Berthing
    given-names: Trine
  - family-names: Bressendorff
    given-names: Simon
  - family-names: Vitting-Seerup
    given-names: Kristoffer
  - family-names: Andersson
    given-names: Robin
  - family-names: Hougaard
    given-names: Karin Sørig
  - family-names: Yauk
    given-names: Carole L.
  - family-names: Halappanavar
    given-names: Sabina
  - family-names: Wallin
    given-names: Håkan
  - family-names: Vogel
    given-names: Ulla
  - family-names: Sandelin
    given-names: Albin
  year: '2017'
  journal: ACS Nano
  doi: 10.1021/acsnano.6b07533
  volume: '11'
  issue: '4'
  start: 3597-3613
repository: https://bioconductor.org/
repository-code: https://github.com/MalteThodberg/nanotubes
commit: eb210cc34b6640352a9bcf04d6f74cc88cedbefd
url: https://github.com/MalteThodberg/nanotubes
date-released: '2026-04-28'
contact:
- family-names: Thodberg
  given-names: Malte
  email: maltethodberg@gmail.com