Package: ncGTW
Type: Package
Title: Alignment of LC-MS Profiles by Neighbor-wise Compound-specific
        Graphical Time Warping with Misalignment Detection
Version: 1.26.0
Author: Chiung-Ting Wu <ctwu@vt.edu>
Maintainer: Chiung-Ting Wu <ctwu@vt.edu>
biocViews: Software, MassSpectrometry, Metabolomics, Alignment
Description: The purpose of ncGTW is to help XCMS for LC-MS data
        alignment. Currently, ncGTW can detect the misaligned feature
        groups by XCMS, and the user can choose to realign these
        feature groups by ncGTW or not.
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
LinkingTo: Rcpp
Suggests: BiocStyle, knitr, testthat, rmarkdown
VignetteBuilder: knitr
Depends: methods, BiocParallel, xcms
Imports: Rcpp, grDevices, graphics, stats
BugReports: https://github.com/ChiungTingWu/ncGTW/issues
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libnetcdf-dev libssl-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:50:36 UTC
RemoteUrl: https://github.com/bioc/ncGTW
RemoteRef: RELEASE_3_23
RemoteSha: f18cf12b6f51ead4f1673163111200cb3b2c876f
NeedsCompilation: yes
Packaged: 2026-10-01 11:19:24 UTC; root