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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "nullranges" in publications use:'
type: software
license: GPL-3.0-only
title: 'nullranges: Generation of null ranges via bootstrapping or covariate matching'
version: 1.18.0
doi: 10.1093/bioinformatics/btad197
identifiers:
- type: doi
  value: 10.32614/CRAN.package.nullranges
- type: url
  value: https://nullranges.github.io/nullranges
abstract: Modular package for generation of sets of ranges representing the null hypothesis.
  These can take the form of bootstrap samples of ranges (using the block bootstrap
  framework of Bickel et al 2010), or sets of control ranges that are matched across
  one or more covariates. nullranges is designed to be inter-operable with other packages
  for analysis of genomic overlap enrichment, including the plyranges Bioconductor
  package.
authors:
- family-names: Love
  given-names: Michael
  email: michaelisaiahlove@gmail.com
  orcid: https://orcid.org/0000-0001-8401-0545
- family-names: Mu
  given-names: Wancen
  orcid: https://orcid.org/0000-0002-5061-7581
- family-names: Davis
  given-names: Eric
  orcid: https://orcid.org/0000-0003-4051-3217
- family-names: Phanstiel
  given-names: Douglas
  orcid: https://orcid.org/0000-0003-2123-0051
- family-names: Lee
  given-names: Stuart
  orcid: https://orcid.org/0000-0003-1179-8436
preferred-citation:
  type: article
  title: 'matchRanges: Generating null hypothesis genomic ranges via covariate-matched
    sampling'
  authors:
  - family-names: Davis
    given-names: Eric S
  - family-names: Mu
    given-names: Wancen
    orcid: https://orcid.org/0000-0002-5061-7581
  - family-names: Lee
    given-names: Stuart
    orcid: https://orcid.org/0000-0003-1179-8436
  - family-names: Dozmorov
    given-names: Mikhail G
  - family-names: Love
    given-names: Michael I
  - family-names: Phanstiel
    given-names: Douglas H
  journal: Bioinformatics
  year: '2023'
  doi: 10.1093/bioinformatics/btad197
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/nullranges/nullranges
commit: b4dd7bf8a7d8748290f066b47ade55809bbbc341
url: https://support.bioconductor.org/tag/nullranges/
date-released: '2026-04-28'
contact:
- family-names: Love
  given-names: Michael
  email: michaelisaiahlove@gmail.com
  orcid: https://orcid.org/0000-0001-8401-0545
references:
- type: article
  title: 'bootRanges: Flexible generation of null sets of genomic ranges for hypothesis
    testing'
  authors:
  - family-names: Mu
    given-names: Wancen
  - family-names: Davis
    given-names: Eric S
  - family-names: Lee
    given-names: Stuart
  - family-names: Dozmorov
    given-names: Mikhail G
  - family-names: Phanstiel
    given-names: Douglas H
  - family-names: Love
    given-names: Michael I
  journal: Bioinformatics
  year: '2023'
  doi: 10.1093/bioinformatics/btad190