Package: omicRexposome
Title: Exposome and omic data associatin and integration analysis
Version: 1.34.0
Authors@R: c(person("Carles", "Hernandez-Ferrer", , "carles.hernandez@isglobal.org", c("aut", "cre")),
    person("Juan R.", "González", ,"juanr.gonzalez@isglobal.org", role = "aut"))
Maintainer: Xavier Escribà Montagut <xavier.escriba@isglobal.org>
Description: omicRexposome systematizes the association evaluation
        between exposures and omic data, taking advantage of
        MultiDataSet for coordinated data management, rexposome for
        exposome data definition and limma for association testing.
        Also to perform data integration mixing exposome and omic data
        using multi co-inherent analysis (omicade4) and multi-canonical
        correlation analysis (PMA).
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
VignetteBuilder: knitr
Depends: R (>= 3.5.0), Biobase
Imports: stats, utils, grDevices, graphics, methods, rexposome, limma,
        sva, ggplot2, ggrepel, PMA, omicade4, gridExtra, MultiDataSet,
        SmartSVA, isva, parallel, SummarizedExperiment, stringr
Suggests: BiocStyle, knitr, rmarkdown, snpStats, brgedata
biocViews: ImmunoOncology, WorkflowStep, MultipleComparison,
        Visualization, GeneExpression, DifferentialExpression,
        DifferentialMethylation, GeneRegulation, Epigenetics,
        Proteomics, Transcriptomics, StatisticalMethod, Regression
Config/pak/sysreqs: cmake libfreetype6-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev libx11-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:46:34 UTC
RemoteUrl: https://github.com/bioc/omicRexposome
RemoteRef: RELEASE_3_23
RemoteSha: 3ca663be9442dcf8b50e7c87c91e1e8427edee3b
NeedsCompilation: no
Packaged: 2026-10-06 11:01:36 UTC; root
Author: Carles Hernandez-Ferrer [aut, cre],
  Juan R. González [aut]