Package: pRolocGUI 2.22.0

Lisa Breckels

pRolocGUI: Interactive visualisation of spatial proteomics data

The package pRolocGUI comprises functions to interactively visualise spatial proteomics data on the basis of pRoloc, pRolocdata and shiny.

Authors:Lisa Breckels [aut, cre], Thomas Naake [aut], Laurent Gatto [aut]

pRolocGUI_2.22.0.tar.gz
pRolocGUI_2.22.0.zip(r-4.7)pRolocGUI_2.22.0.zip(r-4.6)pRolocGUI_2.22.0.zip(r-4.5)
pRolocGUI_2.22.0.tgz(r-4.6-any)pRolocGUI_2.22.0.tgz(r-4.5-any)
pRolocGUI_2.22.0.tar.gz(r-4.7-any)pRolocGUI_2.22.0.tar.gz(r-4.6-any)
pRolocGUI_2.22.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
pRolocGUI/json (API)

# Install 'pRolocGUI' in R:
install.packages('pRolocGUI', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/lgatto/prolocgui/issues

On BioConductor:pRolocGUI-2.23.0(bioc 3.24)pRolocGUI-2.22.0(bioc 3.23)

proteomicsvisualizationgui

6.90 score 8 stars 3 scripts 478 downloads 5 mentions 1 exports 233 dependencies

Last updated from:cd4f2aa2ee (on RELEASE_3_23). Checks:1 WARNING, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksWARNING292
linux-devel-x86_64OK629
source / vignettesOK432
linux-release-x86_64OK563
macos-release-arm64OK268
macos-oldrel-arm64OK306
windows-develOK471
windows-releaseOK478
windows-oldrelOK468
wasm-releaseOK240

Exports:pRolocVis

Dependencies:abindaffyaffyioannotateAnnotationDbiAnnotationFilteraskpassassertthatbase64encBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsbiocmakeBiocManagerBiocParallelbiomaRtBiostringsbitbit64blobbslibcachemcaretclasscliclockclueclustercodacodetoolscolorspacecolourpickercommonmarkcpp11crayoncrosstalkcurldata.tableDBIdbplyrDelayedArraydendextendDEoptimRdiagramdigestdiptestdir.expirydoParalleldplyrDTe1071evaluatefarverfastmapfilelockflexmixFNNfontawesomeforeachformatRfpcfreshfsfutile.loggerfutile.optionsfuturefuture.applygbmgdatagenefiltergenericsGenomicRangesggplot2ggvisglobalsgluegowergridExtragtablegtoolshardhathexbinhighrhmshtmltoolshtmlwidgetshttpuvhttrhttr2hwriterigraphimputeipredIRangesisobanditeratorsjquerylibjsonliteKEGGRESTkernlabKernSmoothknitrlabelinglambda.rLaplacesDemonlaterlatticelavalazyevallifecyclelimmalistenvlitedownlpSolvelubridatemagrittrMALDIquantmarkdownMASSMatrixMatrixGenericsmatrixStatsmclustmemoiseMetaboCoreUtilsmimeminiUImixtoolsmlbenchMLInterfacesModelMetricsmodeltoolsMsCoreUtilsMSnbaseMultiAssayExperimentmvtnormmzIDmzRncdf4nlmennetnumDerivopensslotelparallellypcaMethodspillarpkgconfigplotlyplsplyrpngprabcluspreprocessCoreprettyunitspROCprodlimprogressprogressrpRolocpromisesProtGenericsproxyPSMatchPTModspurrrQFeaturesR6randomForestrappdirsRColorBrewerRcppRcppArmadillorecipesreshape2Rhdf5librlangrmarkdownrobustbaserpartRSQLiterstudioapiS4ArraysS4VectorsS7samplingsassscalessegmentedSeqinfosfsmiscshapeshinyshinydashboardshinydashboardPlusshinyhelpershinyjsshinyWidgetssnowsourcetoolsSparseArraysparsevctrsSpectraSQUAREMstatmodstringistringrSummarizedExperimentsurvivalsysthreejstibbletidyrtidyselecttimechangetimeDatetinytextzdbutf8vctrsviridisviridisLitevsnwaiterwithrxfunXMLxml2xtableXVectoryaml

pRolocGUI - Interactive visualisation of spatial proteomics data

Lisa Breckels, Thomas Naake, Laurent Gatto

Rendered frompRolocGUI.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2022-04-23
Started: 2014-07-02

Readme and manuals

Help Manual

Help pageTopics
Interactive visualisation of spatial proteomics datapRolocVis pRolocVis_aggregate pRolocVis_compare pRolocVis_explore