Package: plier 1.82.0

Crispin Miller
plier: Implements the Affymetrix PLIER algorithm
The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.
Authors:
plier_1.82.0.tar.gz
plier_1.82.0.zip(r-4.7)plier_1.82.0.zip(r-4.6)plier_1.82.0.zip(r-4.5)
plier_1.82.0.tgz(r-4.6-x86_64)plier_1.82.0.tgz(r-4.6-arm64)plier_1.82.0.tgz(r-4.5-x86_64)plier_1.82.0.tgz(r-4.5-arm64)
plier_1.82.0.tar.gz(r-4.7-arm64)plier_1.82.0.tar.gz(r-4.7-x86_64)plier_1.82.0.tar.gz(r-4.6-arm64)plier_1.82.0.tar.gz(r-4.6-x86_64)
plier_1.82.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
plier/json (API)
| # Install 'plier' in R: |
| install.packages('plier', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:plier-1.83.0(bioc 3.24)plier-1.82.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:632a4f8568 (on RELEASE_3_23). Checks:1 ERROR, 4 NOTE, 2 OK, 7 WARNING. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 140 | ||
| linux-devel-arm64 | NOTE | 163 | ||
| linux-devel-x86_64 | NOTE | 157 | ||
| source / vignettes | OK | 194 | ||
| linux-release-arm64 | NOTE | 157 | ||
| linux-release-x86_64 | NOTE | 153 | ||
| macos-release-arm64 | WARNING | 92 | ||
| macos-release-x86_64 | WARNING | 191 | ||
| macos-oldrel-arm64 | WARNING | 79 | ||
| macos-oldrel-x86_64 | WARNING | 417 | ||
| windows-devel | WARNING | 126 | ||
| windows-release | WARNING | 99 | ||
| windows-oldrel | WARNING | 68 | ||
| wasm-release | OK | 114 |
Exports:justPlier
Dependencies:affyaffyioBiobaseBiocGenericsBiocManagergenericspreprocessCore
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Implements the PLIER algorithm | justPlier |