Package: procoil Type: Package Title: Prediction of Oligomerization of Coiled Coil Proteins Version: 2.40.0 Date: 2025-09-19 Depends: R (>= 3.3.0), kebabs Imports: methods, stats, graphics, S4Vectors, Biostrings, utils Suggests: knitr Authors@R: c(person(given = "Ulrich", family = "Bodenhofer", role = c("aut", "cre"), email = "ulrich@bodenhofer.com")) Maintainer: Ulrich Bodenhofer Description: The package allows for predicting whether a coiled coil sequence (amino acid sequence plus heptad register) is more likely to form a dimer or more likely to form a trimer. Additionally to the prediction itself, a prediction profile is computed which allows for determining the strengths to which the individual residues are indicative for either class. Prediction profiles can also be visualized as curves or heatmaps. License: GPL (>= 2) Collate: AllClasses.R access-methods.R show-methods.R plot-methods.R predict-methods.R weights-methods.R profile-methods.R readCCModel.R writeCCModel.R fitted-methods.R heatmap-methods.R URL: https://github.com/UBod/procoil VignetteBuilder: knitr LazyLoad: yes LazyData: yes biocViews: Proteomics, Classification, SupportVectorMachine Config/pak/sysreqs: zlib1g-dev Repository: Bioconductor 3.23 Date/Publication: 2026-04-28 12:35:09 UTC RemoteUrl: https://github.com/bioc/procoil RemoteRef: RELEASE_3_23 RemoteSha: 1d837333837c5d2b9ece6cadff96714f43d6ad2f NeedsCompilation: no Packaged: 2026-07-10 06:02:23 UTC; root Author: Ulrich Bodenhofer [aut, cre]