# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "rGREAT" in publications use:'
type: software
license: MIT
title: 'rGREAT: GREAT Analysis - Functional Enrichment on Genomic Regions'
version: 2.14.0
doi: 10.1093/bioinformatics/btac745
identifiers:
- type: doi
  value: 10.32614/CRAN.package.rGREAT
abstract: GREAT (Genomic Regions Enrichment of Annotations Tool) is a type of functional
  enrichment analysis directly performed on genomic regions. This package implements
  the GREAT algorithm (the local GREAT analysis), also it supports directly interacting
  with the GREAT web service (the online GREAT analysis). Both analysis can be viewed
  by a Shiny application. rGREAT by default supports more than 600 organisms and a
  large number of gene set collections, as well as self-provided gene sets and organisms
  from users. Additionally, it implements a general method for dealing with background
  regions.
authors:
- family-names: Gu
  given-names: Zuguang
  email: guzuguang@suat-sz.edu.cn
  orcid: https://orcid.org/0000-0002-7395-8709
preferred-citation:
  type: article
  title: 'rGREAT: an R/Bioconductor package for functional enrichment on genomic regions'
  authors:
  - family-names: Gu
    given-names: Zuguang
    email: guzuguang@suat-sz.edu.cn
    orcid: https://orcid.org/0000-0002-7395-8709
  - family-names: Huebschmann
    given-names: Daniel
  journal: Bioinformatics
  year: '2022'
  doi: 10.1093/bioinformatics/btac745
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/jokergoo/rGREAT
commit: a9b8c88c7db3abe99ab696cb02553f16496554fc
url: http://great.stanford.edu/public/html/
date-released: '2026-01-30'
contact:
- family-names: Gu
  given-names: Zuguang
  email: guzuguang@suat-sz.edu.cn
  orcid: https://orcid.org/0000-0002-7395-8709