Package: rain 1.46.0
Paul F. Thaben
rain: Rhythmicity Analysis Incorporating Non-parametric Methods
This package uses non-parametric methods to detect rhythms in time series. It deals with outliers, missing values and is optimized for time series comprising 10-100 measurements. As it does not assume expect any distinct waveform it is optimal or detecting oscillating behavior (e.g. circadian or cell cycle) in e.g. genome- or proteome-wide biological measurements such as: micro arrays, proteome mass spectrometry, or metabolome measurements.
Authors:
rain_1.46.0.tar.gz
rain_1.46.0.zip(r-4.7)rain_1.46.0.zip(r-4.6)rain_1.46.0.zip(r-4.5)
rain_1.46.0.tgz(r-4.6-any)rain_1.46.0.tgz(r-4.5-any)
rain_1.46.0.tar.gz(r-4.7-any)rain_1.46.0.tar.gz(r-4.6-any)
rain_1.46.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
rain/json (API)
NEWS
| # Install 'rain' in R: |
| install.packages('rain', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
- menetRNASeqMouseLiver - Time courses of gene expression in mouse liver
On BioConductor:rain-1.47.0(bioc 3.24)rain-1.46.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
timecoursegeneticssystemsbiologyproteomicsmicroarraymultiplecomparison
Last updated from:8e679c1993 (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 165 | ||
| linux-devel-x86_64 | NOTE | 168 | ||
| source / vignettes | OK | 228 | ||
| linux-release-x86_64 | NOTE | 463 | ||
| macos-release-arm64 | NOTE | 86 | ||
| macos-oldrel-arm64 | NOTE | 97 | ||
| windows-devel | NOTE | 98 | ||
| windows-release | NOTE | 81 | ||
| windows-oldrel | NOTE | 89 | ||
| wasm-release | OK | 103 |
Exports:rain
Dependencies:BiobaseBiocGenericsgenericsgmplatticeMASSMatrixmulttestsurvival
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Rythmicity Analysis incooperating Non-parametric Methods | rain-package |
| Time courses of gene expression in mouse liver | menetRNASeqMouseLiver |
| Detection of rhythmic behavior in time series. | rain |