Package: randRotation 1.24.0
Peter Hettegger
randRotation: Random Rotation Methods for High Dimensional Data with Batch Structure
A collection of methods for performing random rotations on high-dimensional, normally distributed data (e.g. microarray or RNA-seq data) with batch structure. The random rotation approach allows exact testing of dependent test statistics with linear models following arbitrary batch effect correction methods.
Authors:
randRotation_1.24.0.tar.gz
randRotation_1.24.0.zip(r-4.7)randRotation_1.24.0.zip(r-4.6)randRotation_1.24.0.zip(r-4.5)
randRotation_1.24.0.tgz(r-4.6-any)randRotation_1.24.0.tgz(r-4.5-any)
randRotation_1.24.0.tar.gz(r-4.7-any)randRotation_1.24.0.tar.gz(r-4.6-any)
randRotation_1.24.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
randRotation/json (API)
NEWS
| # Install 'randRotation' in R: |
| install.packages('randRotation', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/phettegger/randrotation/issues
On BioConductor:randRotation-1.25.0(bioc 3.24)randRotation-1.23.0(bioc 3.23)
softwaresequencingbatcheffectbiomedicalinformaticsrnaseqpreprocessingmicroarraydifferentialexpressiongeneexpressiongeneticsmicrornaarraynormalizationstatisticalmethod
Last updated from:f0c8825c87 (on RELEASE_3_23). Checks:1 WARNING, 6 ERROR, 2 OK, 1 NOTE. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 155 | ||
| linux-devel-x86_64 | ERROR | 225 | ||
| source / vignettes | OK | 237 | ||
| linux-release-x86_64 | ERROR | 206 | ||
| macos-release-arm64 | ERROR | 89 | ||
| macos-oldrel-arm64 | ERROR | 103 | ||
| windows-devel | ERROR | 127 | ||
| windows-release | ERROR | 128 | ||
| windows-oldrel | NOTE | 140 | ||
| wasm-release | OK | 125 |
Exports:contrastModelinitBatchRandrotinitRandrotpFdrqqunifrandorthrandpermutrandrotrotateStatshowweightsX_decomp
