Overview | Data Sources | Basics | Installation | Getting Started | Data Structure | Molecular Data | Accessing sampleData | Adding additional data to a MolData object's eSetList | Drug Data | featureData for Drug Activities | sampleData for DrugData Objects | Session Information | References
Package: rcellminerData 2.34.0
Augustin Luna
rcellminerData: rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines
The NCI-60 cancer cell line panel has been used over the course of several decades as an anti-cancer drug screen. This panel was developed as part of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the U.S. National Cancer Institute (NCI). Thousands of compounds have been tested on the NCI-60, which have been extensively characterized by many platforms for gene and protein expression, copy number, mutation, and others (Reinhold, et al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/ cellminer) has been to integrate data from multiple platforms used to analyze the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60 data.
Authors:
rcellminerData_2.34.0.tar.gz
rcellminerData_2.34.0.tar.gz(r-4.7-any)rcellminerData_2.34.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rcellminerData/json (API)
| # Install 'rcellminerData' in R: |
| install.packages('rcellminerData', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
On BioConductor:rcellminerData-2.35.0(data/experiment 3.24)rcellminerData-2.34.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
cancerdatacopynumbervariationdataexpressiondatasnpdatancimicroarraydatamirnadatadatapkg
Last updated from:34f372d906 (on RELEASE_3_23). Checks:1 ERROR, 2 WARNING, 1 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 184 | ||
| linux-devel | WARNING | 553 | ||
| source / vignettes | OK | 830 | ||
| linux-release | WARNING | 481 |
Exports:
Dependencies:BiobaseBiocGenericsgenerics
