Package: receptLoss
Type: Package
Title: Unsupervised Identification of Genes with Expression Loss in
        Subsets of Tumors
Version: 1.24.0
Author: Daniel Pique, John Greally, Jessica Mar
Maintainer: Daniel Pique <daniel.pique@med.einstein.yu.edu>
Description: receptLoss identifies genes whose expression is lost in
        subsets of tumors relative to normal tissue. It is particularly
        well-suited in cases where the number of normal tissue samples
        is small, as the distribution of gene expression in normal
        tissue samples is approximated by a Gaussian. Originally
        designed for identifying nuclear hormone receptor expression
        loss but can be applied transcriptome wide as well.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
RoxygenNote: 7.1.0
Imports: dplyr, ggplot2, magrittr, tidyr, SummarizedExperiment
Suggests: knitr, rmarkdown, testthat (>= 2.1.0), here
VignetteBuilder: knitr
biocViews: GeneExpression, StatisticalMethod
PackageStatus: Deprecated
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:51:57 UTC
RemoteUrl: https://github.com/bioc/receptLoss
RemoteRef: RELEASE_3_23
RemoteSha: 08b173059633bf0b98c5a94080d78fc3765f2715
NeedsCompilation: no
Packaged: 2026-10-17 09:48:37 UTC; root