# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "scDiagnostics" in publications use:'
type: software
license: Artistic-2.0
title: 'scDiagnostics: Cell type annotation diagnostics'
version: 1.6.0
doi: 10.32614/CRAN.package.scDiagnostics
abstract: The scDiagnostics package provides diagnostic plots to assess the quality
  of cell type assignments from single cell gene expression profiles. The implemented
  functionality allows to assess the reliability of cell type annotations, investigate
  gene expression patterns, and explore relationships between different cell types
  in query and reference datasets allowing users to detect potential misalignments
  between reference and query datasets. The package also provides visualization capabilities
  for diagnostics purposes.
authors:
- family-names: Christidis
  given-names: Anthony
  email: anthony-alexander_christidis@hms.harvard.edu
  orcid: https://orcid.org/0000-0002-4565-6279
- family-names: Ghazi
  given-names: Andrew
- family-names: Chawla
  given-names: Smriti
- family-names: Geistlinger
  given-names: Ludwig
- family-names: Gentleman
  given-names: Robert
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/ccb-hms/scDiagnostics
commit: 0f4d33b878da8645b5cb8425408a4e1e06bddcd3
url: https://github.com/ccb-hms/scDiagnostics
date-released: '2026-04-28'
contact:
- family-names: Christidis
  given-names: Anthony
  email: anthony-alexander_christidis@hms.harvard.edu
  orcid: https://orcid.org/0000-0002-4565-6279