# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "scHiCcompare" in publications use:'
type: software
license: MIT
title: 'scHiCcompare: Differential Analysis of Single-cell Hi-C Data'
version: 1.4.0
doi: 10.1101/2024.11.06.622369
identifiers:
- type: doi
  value: 10.32614/CRAN.package.scHiCcompare
abstract: This package provides functions for differential chromatin interaction analysis
  between two single-cell Hi-C data groups. It includes tools for imputation, normalization,
  and differential analysis of chromatin interactions. The package implements pooling
  techniques for imputation and offers methods to normalize and test for differential
  interactions across single-cell Hi-C datasets.
authors:
- family-names: Nguyen
  given-names: My
  email: hamy.12398@gmail.com
  orcid: https://orcid.org/0009-0003-1118-7085
- family-names: Dozmorov
  given-names: Mikhail
  email: mikhail.dozmorov@gmail.com
  orcid: https://orcid.org/0000-0002-0086-8358
preferred-citation:
  type: article
  title: 'scHiCcompare: an R package for differential analysis of single-cell Hi-C
    data'
  authors:
  - family-names: Nguyen
    given-names: My
    email: hamy.12398@gmail.com
    orcid: https://orcid.org/0009-0003-1118-7085
  - family-names: Wall
    given-names: Brydon P. G.
  - family-names: Harrell
    given-names: J. Chuck
  - family-names: Dozmorov
    given-names: Mikhail G.
  year: '2024'
  journal: bioRxiv
  doi: 10.1101/2024.11.06.622369
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/dozmorovlab/ScHiCcompare
commit: e578bc9cae9d8c4d6b4321176b9a3b7027019aa8
url: https://github.com/dozmorovlab/ScHiCcompare
date-released: '2026-04-28'
contact:
- family-names: Nguyen
  given-names: My
  email: hamy.12398@gmail.com
  orcid: https://orcid.org/0009-0003-1118-7085