NEWS

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seqpac 1.1.1

• First hard release August 2021

seqpac 1.0.4

• Major updates to accomodate package specific tests, and devtools/BiocCheck
• S4 compatability
• merge_lanes can now merge flowcell lanes
• make_conv can now generate conversion tables between for example UCSC, NCBI and Ensembl chromosome names

seqpac 1.0.3

• Streamlined PAC generation and annotation
• Vignette update

seqpac 1.0.2

• The fundation of functions for sequence-based counting and annotation is set.

seqpac 1.0.1

• First github version in 2020
• Working version for constructing PAC objects (S3)

seqpac 0.99.18

• Many minor updates to comply with Bioconducter review

seqpac 0.99.8

• New attempt with Bioconducter
• Many updates
• Make_count now support chunking and on-disk procesing for low-end systems
• More efficient Examples
• Minor bug corrections
• Quick start in vignette

seqpac 0.99.4

• Correcting notes from bioconductor reviewer
• Less time consuming examples and tests

seqpac 0.99.3

• Correcting notes from bioconductor reviewer

seqpac 0.99.2

• Correcting a few errors/warnings discovered by bioconductor.org

seqpac 0.99.1

• Preparations for Bioconductor
• Updates in vignette and manuals to accomodate more autonomous examples
• Some minor bug fixes and changes to the reanno workflow

seqpac 0.99.0

• Due to rules for Bioconductor submissions version number was decreased --Biocundoctor submisson ———-