# ------------------------------------------------ # CITATION.cff file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # ------------------------------------------------ cff-version: 1.2.0 message: 'To cite package "sequencing" in publications use:' type: software license: Artistic-2.0 title: 'sequencing: Introduction to Bioconductor for Sequence Data' version: 1.36.0 abstract: 'Bioconductor enables the analysis and comprehension of high- throughput genomic data. We have a vast number of packages that allow rigorous statistical analysis of large data while keeping technological artifacts in mind. Bioconductor helps users place their analytic results into biological context, with rich opportunities for visualization. Reproducibility is an important goal in Bioconductor analyses. Different types of analysis can be carried out using Bioconductor, for example; Sequencing : RNASeq, ChIPSeq, variants, copy number etc.; Microarrays: expression, SNP, etc.; Domain specific analysis : Flow cytometry, Proteomics etc. For these analyses, one typically imports and works with diverse sequence-related file types, including fasta, fastq, BAM, gtf, bed, and wig files, among others. Bioconductor packages support import, common and advanced sequence manipulation operations such as trimming, transformation, and alignment including quality assessment.' authors: - family-names: Arora given-names: Sonali email: sarora@fredhutch.org - family-names: Morgan given-names: Martin email: martin.morgan@roswellpark.org - name: Bioconductor Package Maintainer email: maintainer@bioconductor.org repository: https://bioconductor.org/ commit: 68f9b361da1003803f9ec69affd129052473062b url: https://www.bioconductor.org/help/workflows/sequencing/ date-released: '2017-10-18' contact: - name: Bioconductor Package Maintainer email: maintainer@bioconductor.org