Package: snifter
Type: Package
Title: R wrapper for the python openTSNE library
Version: 1.22.0
Date: 2025-07-17
Authors@R: c(
    person("Alan", "O'Callaghan", role = c("aut", "cre"), email = "alan.ocallaghan@outlook.com"),
    person("Aaron", "Lun", role = c("aut")))
Depends: R (>= 4.0.0)
Imports: basilisk, reticulate, irlba, stats, assertthat
Description: Provides an R wrapper for the implementation of FI-tSNE
        from the python package openTNSE. See Poličar et al. (2019)
        <doi:10.1101/731877> and the algorithm described by Linderman
        et al. (2018) <doi:10.1038/s41592-018-0308-4>.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.1
VignetteBuilder: knitr
biocViews: DimensionReduction, Visualization, Software, SingleCell,
        Sequencing
StagedInstall: no
BugReports: https://github.com/Alanocallaghan/snifter/issues
URL: https://bioconductor.org/packages/snifter
Suggests: knitr, rmarkdown, BiocStyle, ggplot2, testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/pak/sysreqs: libpng-dev python3
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:53:23 UTC
RemoteUrl: https://github.com/bioc/snifter
RemoteRef: RELEASE_3_23
RemoteSha: 4e3b6e7830f555f9f48925a2aa9282b3d24ff512
NeedsCompilation: no
Packaged: 2026-09-19 09:02:50 UTC; root
Author: Alan O'Callaghan [aut, cre],
  Aaron Lun [aut]
Maintainer: Alan O'Callaghan <alan.ocallaghan@outlook.com>