Pardo B, Spangler A, Weber LM, Hicks SC, Jaffe AE, Martinowich K, Maynard KR, Collado-Torres L (2022). “spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data.” BMC Genomics. doi:10.1186/s12864-022-08601-w. https://doi.org/10.1186/s12864-022-08601-w.

Maynard KR, Collado-Torres L, Weber LM, Uytingco C, Barry BK, Williams SR, II JLC, Tran MN, Besich Z, Tippani M, Chew J, Yin Y, Kleinman JE, Hyde TM, Rao N, Hicks SC, Martinowich K, Jaffe AE (2021). “Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.” Nature Neuroscience. doi:10.1038/s41593-020-00787-0. https://www.nature.com/articles/s41593-020-00787-0.

Huuki-Myers LA, Spangler A, Eagles NJ, Montgomergy KD, Kwon SH, Guo B, Grant-Peters M, Divecha HR, Tippani M, Sriworarat C, Nguyen AB, Ravichandran P, Tran MN, Seyedian A, Consortium P, Hyde TM, Kleinman JE, Battle A, Page SC, Ryten M, Hicks SC, Martinowich K, Collado-Torres L, Maynard KR (2024). “A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex.” Science. doi:10.1126/science.adh1938. https://doi.org/10.1126/science.adh1938.

Kwon SH, Parthiban S, Tippani M, Divecha HR, Eagles NJ, Lobana JS, Williams SR, Mark M, Bharadwaj RA, Kleinman JE, Hyde TM, Page SC, Hicks SC, Martinowich K, Maynard KR, Collado-Torres L (2023). “Influence of Alzheimer’s disease related neuropathology on local microenvironment gene expression in the human inferior temporal cortex.” GEN Biotechnology. doi:10.1089/genbio.2023.0019. https://doi.org/10.1089/genbio.2023.0019.

Corresponding BibTeX entries:

  @Article{,
    title = {spatialLIBD: an R/Bioconductor package to visualize
      spatially-resolved transcriptomics data},
    author = {Brenda Pardo and Abby Spangler and Lukas M. Weber and
      Stephanie C. Hicks and Andrew E. Jaffe and Keri Martinowich and
      Kristen R. Maynard and Leonardo Collado-Torres},
    year = {2022},
    journal = {BMC Genomics},
    doi = {10.1186/s12864-022-08601-w},
    url = {https://doi.org/10.1186/s12864-022-08601-w},
  }

  @Article{,
    title = {Transcriptome-scale spatial gene expression in the human
      dorsolateral prefrontal cortex},
    author = {Kristen R. Maynard and Leonardo Collado-Torres and Lukas
      M. Weber and Cedric Uytingco and Brianna K. Barry and Stephen R.
      Williams and Joseph L. Catallini II and Matthew N. Tran and
      Zachary Besich and Madhavi Tippani and Jennifer Chew and Yifeng
      Yin and Joel E. Kleinman and Thomas M. Hyde and Nikhil Rao and
      Stephanie C. Hicks and Keri Martinowich and Andrew E. Jaffe},
    year = {2021},
    journal = {Nature Neuroscience},
    doi = {10.1038/s41593-020-00787-0},
    url = {https://www.nature.com/articles/s41593-020-00787-0},
  }

  @Article{,
    title = {A data-driven single-cell and spatial transcriptomic map
      of the human prefrontal cortex},
    author = {Louise A. Huuki-Myers and Abby Spangler and Nicholas J.
      Eagles and Kelsey D. Montgomergy and Sang Ho Kwon and Boyi Guo
      and Melissa Grant-Peters and Heena R. Divecha and Madhavi Tippani
      and Chaichontat Sriworarat and Annie B. Nguyen and Prashanthi
      Ravichandran and Matthew N. Tran and Arta Seyedian and
      PsychENCODE Consortium and Thomas M. Hyde and Joel E. Kleinman
      and Alexis Battle and Stephanie C. Page and Mina Ryten and
      Stephanie C. Hicks and Keri Martinowich and Leonardo
      Collado-Torres and Kristen R. Maynard},
    year = {2024},
    journal = {Science},
    doi = {10.1126/science.adh1938},
    url = {https://doi.org/10.1126/science.adh1938},
  }

  @Article{,
    title = {Influence of Alzheimer’s disease related neuropathology on
      local microenvironment gene expression in the human inferior
      temporal cortex},
    author = {Sang Ho Kwon and Sowmya Parthiban and Madhavi Tippani and
      Heena R. Divecha and Nicholas J. Eagles and Jashandeep S. Lobana
      and Stephen R. Williams and Michelle Mark and Rahul A. Bharadwaj
      and Joel E. Kleinman and Thomas M. Hyde and Stephanie C. Page and
      Stephanie C. Hicks and Keri Martinowich and Kristen R. Maynard
      and Leonardo Collado-Torres},
    year = {2023},
    journal = {GEN Biotechnology},
    doi = {10.1089/genbio.2023.0019},
    url = {https://doi.org/10.1089/genbio.2023.0019},
  }