Package: statTarget 1.42.0
Hemi Luan
statTarget: Statistical Analysis of Molecular Profiles
A streamlined tool provides a graphical user interface for quality control based signal drift correction (QC-RFSC), integration of data from multi-batch MS-based experiments, and the comprehensive statistical analysis in metabolomics and proteomics.
Authors:
statTarget_1.42.0.tar.gz
statTarget_1.42.0.zip(r-4.7)statTarget_1.42.0.zip(r-4.6)statTarget_1.42.0.zip(r-4.5)
statTarget_1.42.0.tgz(r-4.6-any)statTarget_1.42.0.tgz(r-4.5-any)
statTarget_1.42.0.tar.gz(r-4.7-any)statTarget_1.42.0.tar.gz(r-4.6-any)
statTarget_1.42.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
statTarget/json (API)
NEWS
| # Install 'statTarget' in R: |
| install.packages('statTarget', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:statTarget-1.43.0(bioc 3.24)statTarget-1.42.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
immunooncologymetabolomicsproteomicsmachine learninglipidomicsmassspectrometryqualitycontrolnormalizationqc-rfsccombatdifferentialexpressionbatcheffectvisualizationmultiplecomparisonpreprocessingsoftware
Last updated from:5012ea683e (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 159 | ||
| linux-devel-x86_64 | NOTE | 152 | ||
| source / vignettes | OK | 223 | ||
| linux-release-x86_64 | NOTE | 199 | ||
| macos-release-arm64 | NOTE | 87 | ||
| macos-oldrel-arm64 | NOTE | 102 | ||
| windows-devel | NOTE | 123 | ||
| windows-release | NOTE | 96 | ||
| windows-oldrel | NOTE | 85 | ||
| wasm-release | OK | 108 |
Exports:mdsPlotpredict_RFpvimPlotrForestshiftCorshiftCor_dQCstatAnalysis
Dependencies:DEoptimRevaluatehighrimputeknitrlatticemvtnormpcaPPpdistplsplyrrandomForestRcpprobustbaseROCrrcovxfunyaml
QC-free approach with Combat method
Rendered fromCombat.Rmdusingknitr::rmarkdownon May 30 2026.Last update: 2019-02-17
Started: 2019-02-17
pathway analysis (mummichog)
Rendered frompathway_analysis.Rmdusingknitr::rmarkdownon May 30 2026.Last update: 2019-01-15
Started: 2019-01-15
statTarget
Rendered fromstatTarget.Rmdusingknitr::rmarkdownon May 30 2026.Last update: 2024-06-12
Started: 2016-10-07
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Statistical Analysis of Molecular Profiles | statTarget-package statTarget |
| MDSplot in statTarget | mdsPlot |
| preidict function for random forest objects in statTarget | predict_RF |
| Gini importance and permutation-based variable importance measures plots | pvimPlot |
| Random Forest classfication in statTarget | rForest |
| shiftCor | shiftCor |
| QC-free based signal correction | shiftCor_dQC shiftCor_dQC (deprecated) |
| statAnalysis for statistical analysis for omics data or others. | statAnalysis |
