Package: tidysbml Type: Package Title: Extract SBML's data into dataframes Version: 1.6.0 Authors@R: c( person("Veronica", "Paparozzi", role = c("aut", "cre"), email = "veronicapaparozzi1@gmail.com", comment = c(ORCID = "0009-0000-2961-1559")), person("Christine", "Nardini", role = c("aut"), email = "christine.nardini@cnr.it", comment = c(ORCID = "0000-0001-7601-321X")) ) Description: Starting from one SBML file, it extracts information from each listOfCompartments, listOfSpecies and listOfReactions element by saving them into data frames. Each table provides one row for each entity (i.e. either compartment, species, reaction or speciesReference) and one set of columns for the attributes, one column for the content of the 'notes' subelement and one set of columns for the content of the 'annotation' subelement. License: CC BY 4.0 Encoding: UTF-8 RoxygenNote: 7.3.1 Imports: xml2, methods Depends: R (>= 4.4.0) Suggests: rmarkdown, knitr, BiocStyle, biomaRt, RCy3, testthat (>= 3.0.0) biocViews: GraphAndNetwork, Network, Pathways, Software VignetteBuilder: knitr URL: https://github.com/veronicapaparozzi/tidysbml BugReports: https://github.com/veronicapaparozzi/tidysbml/issues Config/testthat/edition: 3 Config/pak/sysreqs: libxml2-dev Repository: Bioconductor 3.23 Date/Publication: 2026-04-28 13:03:37 UTC RemoteUrl: https://github.com/bioc/tidysbml RemoteRef: RELEASE_3_23 RemoteSha: 17cdb8b3fe5dd1d7fd230d1e64d5cc65f4e67300 NeedsCompilation: no Packaged: 2026-07-25 06:47:48 UTC; root Author: Veronica Paparozzi [aut, cre] (ORCID: ), Christine Nardini [aut] (ORCID: ) Maintainer: Veronica Paparozzi