# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "triplex" in publications use:'
type: software
license: BSD-2-Clause
title: 'triplex: Search and visualize intramolecular triplex-forming sequences in
  DNA'
version: 1.52.0
doi: 10.1093/bioinformatics/btt299
identifiers:
- type: doi
  value: 10.32614/CRAN.package.triplex
abstract: This package provides functions for identification and visualization of
  potential intramolecular triplex patterns in DNA sequence. The main functionality
  is to detect the positions of subsequences capable of folding into an intramolecular
  triplex (H-DNA) in a much larger sequence. The potential H-DNA (triplexes) should
  be made of as many cannonical nucleotide triplets as possible. The package includes
  visualization showing the exact base-pairing in 1D, 2D or 3D.
authors:
- family-names: Hon
  given-names: Jiri
  email: jiri.hon@gmail.com
- family-names: Lexa
  given-names: Matej
  email: lexa@fi.muni.cz
- family-names: Martinek
  given-names: Tomas
  email: martinto@fit.vutbr.cz
- family-names: Rajdl
  given-names: Kamil
preferred-citation:
  type: article
  title: 'Triplex: an R/Bioconductor package for identification and visualization
    of potential intramolecular triplex patterns in DNA sequences'
  authors:
  - family-names: Hon
    given-names: Jiri
    email: jiri.hon@gmail.com
  - family-names: Martinek
    given-names: Tomas
    email: martinto@fit.vutbr.cz
  - family-names: Rajdl
    given-names: Kamil
  - family-names: Lexa
    given-names: Matej
    email: lexa@fi.muni.cz
  year: '2013'
  doi: 10.1093/bioinformatics/btt299
  url: http://bioinformatics.oxfordjournals.org/content/early/2013/05/24/bioinformatics.btt299.abstract
  journal: Bioinformatics
repository: https://bioc-release.r-universe.dev
commit: 4feb2c4d52b33745d7b96c0147575520db9292c2
url: http://www.fi.muni.cz/~lexa/triplex/
date-released: '2013-09-28'
contact:
- family-names: Hon
  given-names: Jiri
  email: jiri.hon@gmail.com