Overview | sessionInfo()
Package: tweeDEseqCountData 1.50.0
Dolors Pelegri-Siso
tweeDEseqCountData: RNA-seq count data employed in the vignette of the tweeDEseq package
RNA-seq count data from Pickrell et al. (2010) employed to illustrate the use of the Poisson-Tweedie family of distributions with the tweeDEseq package.
Authors:
tweeDEseqCountData_1.50.0.tar.gz
tweeDEseqCountData_1.50.0.tar.gz(r-4.7-any)tweeDEseqCountData_1.50.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
tweeDEseqCountData/json (API)
| # Install 'tweeDEseqCountData' in R: |
| install.packages('tweeDEseqCountData', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/isglobal-brge/tweedeseqcountdata/issues
Datasets:
- annotEnsembl63 - Annotation data from Ensemble Release 63
- hkGenes - Housekeeping Genes from Eisenberg and Levanon
On BioConductor:tweeDEseqCountData-1.51.0(data/experiment 3.24)tweeDEseqCountData-1.50.0(data/experiment 3.23)
genomehomo_sapiens_datarnaseqdatadatapkg
Last updated from:3f0a49f0b1 (on RELEASE_3_23). Checks:3 WARNING, 1 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 168 | ||
| linux-devel | WARNING | 192 | ||
| source / vignettes | OK | 272 | ||
| linux-release | WARNING | 180 |
Exports:
Dependencies:BiobaseBiocGenericsgenerics
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| RNA-seq count data employed in the vignette of the tweeDEseq package | tweeDEseqCountData-package |
| Annotation data from Ensemble Release 63 | annotEnsembl63 |
| RNA-seq count data from Cheung et al. (2010) | cheung cheung.eset |
| Matching microarray and RNA-seq data from human lymphoblastoid cell lines | commonPickrell1Huang cqnNormCommon cqnNormCommonSamples huangArrayRMAnoBatchCommon.eset huangArrayRMAnoBatchCommonSamples.eset pickrell1countsCommon.eset pickrell1countsCommonSamples.eset pickrell1countsCQNcommon.eset pickrell1countsCQNcommonSamples.eset |
| Genes with documented sex-specific expression | genderGenes msYgenes XiEgenes |
| Housekeeping Genes from Eisenberg and Levanon (2003) | hkGenes |
| RNA-seq count data from Montgomery et al. (2010) | montgomery montgomery.eset |
| RNA-seq count data from Pickrell et al. (2010) | pickrell pickrell.eset pickrell1 pickrell1.eset pickrell1Norm pickrell1Norm.eset pickrellNorm pickrellNorm.eset |
