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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "universalmotif" in publications use:'
type: software
license: GPL-3.0-only
title: 'universalmotif: Import, Modify, and Export Motifs with R'
version: 1.30.1
doi: 10.21105/joss.07012
identifiers:
- type: doi
  value: 10.32614/CRAN.package.universalmotif
abstract: Allows for importing most common motif types into R for use by functions
  provided by other Bioconductor motif-related packages. Motifs can be exported into
  most major motif formats from various classes as defined by other Bioconductor packages.
  A suite of motif and sequence manipulation and analysis functions are included,
  including enrichment, comparison, P-value calculation, shuffling, trimming, higher-order
  motifs, and others.
authors:
- family-names: Tremblay
  given-names: Benjamin Jean-Marie
  email: benjamin.tremblay@uwaterloo.ca
  orcid: https://orcid.org/0000-0002-7441-2951
preferred-citation:
  type: article
  title: 'universalmotif: An R package for biological motif analysis'
  authors:
  - family-names: Tremblay
    given-names: Benjamin JM
  journal: Journal of Open Source Software
  volume: '9'
  year: '2024'
  url: https://joss.theoj.org/papers/10.21105/joss.07012
  doi: 10.21105/joss.07012
  start: '7012'
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/bjmt/universalmotif
commit: d18451df798def6bac7c55dd6e12d24acb62bd5f
url: https://bioconductor.org/packages/universalmotif/
date-released: '2026-05-03'
contact:
- family-names: Tremblay
  given-names: Benjamin Jean-Marie
  email: benjamin.tremblay@uwaterloo.ca
  orcid: https://orcid.org/0000-0002-7441-2951