Overview of VULCAN | Citation | Installation of vulcandata package | Getting started | Generate a example annotation file | Access example objects
Package: vulcandata 1.34.0
Federico M. Giorgi
vulcandata: VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset
This package provides a dummy regulatory network and ChIP-Seq dataset for running examples in the vulcan package
Authors:
vulcandata_1.34.0.tar.gz
vulcandata_1.34.0.tar.gz(r-4.7-any)vulcandata_1.34.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
vulcandata/json (API)
| # Install 'vulcandata' in R: |
| install.packages('vulcandata', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:vulcandata-1.35.1(data/experiment 3.24)vulcandata-1.34.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimentdatahomo_sapiens_datacancerdatachipseqdatadatapkg
Last updated from:a678696654 (on RELEASE_3_23). Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 125 | ||
| linux-devel | NOTE | 155 | ||
| source / vignettes | OK | 168 | ||
| linux-release | NOTE | 193 |
Exports:vulcanexamplevulcansheet
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Function to load an example VULCAN dataset into the workspace | vulcanexample |
| FUnction to generate an import sheet CSV file for the vulcan test set | vulcansheet |
