| Title: | Yeast RNA-Seq Experimental Data from Lee et al. 2008 |
|---|---|
| Description: | A selection of RNA-Seq data from a yeast transcriptome experiment. |
| Authors: | James H. Bullard and Kasper D. Hansen |
| Maintainer: | J. Bullard <[email protected]> |
| License: | GPL |
| Version: | 0.50.0 |
| Built: | 2026-10-10 11:05:03 UTC |
| Source: | https://github.com/bioc/yeastRNASeq |
Gene counts for an Illumina sequencing experiment. These counts
represent summarizations over the data in the yeastAligned
object using the annotation from the yeastAnno object, both
from this package.
data(geneLevelData)data(geneLevelData)
A citation for the dataset may be generated using
citation("yeastRNASeq").
The package vignette.
A four element list of AlignedRead objects from the ShortRead package from 4 yeast lanes of a Solexa experiment: Lee et al. PloS Genetics 2008.
The data represents a random subsample of reads from 4 lanes (2 wild-type, 2 mutant lanes)
data(yeastAligned)data(yeastAligned)
A citation for the dataset may be generated using
citation("yeastRNASeq").
The package vignette.
Annotation for S. cerevisiae downloaded from Ensembl using the biomaRt package in the fall of 2009 and post-processed. This file should not be used for analyses purposes, but rather demonstrates some functionality of various packages.
data(geneLevelData)data(geneLevelData)
A citation for the dataset may be generated using
citation("yeastRNASeq").
The package vignette.