Package: ASEB 1.56.0

Likun Wang

ASEB: Predict Acetylated Lysine Sites

ASEB is an R package to predict lysine sites that can be acetylated by a specific KAT-family.

Authors:Likun Wang <[email protected]> and Tingting Li <[email protected]>.

ASEB_1.56.0.tar.gz
ASEB_1.56.0.zip(r-4.7)ASEB_1.56.0.zip(r-4.6)ASEB_1.56.0.zip(r-4.5)
ASEB_1.56.0.tgz(r-4.6-x86_64)ASEB_1.56.0.tgz(r-4.6-arm64)ASEB_1.56.0.tgz(r-4.5-x86_64)ASEB_1.56.0.tgz(r-4.5-arm64)
ASEB_1.56.0.tar.gz(r-4.7-arm64)ASEB_1.56.0.tar.gz(r-4.7-x86_64)ASEB_1.56.0.tar.gz(r-4.6-arm64)ASEB_1.56.0.tar.gz(r-4.6-x86_64)
ASEB_1.56.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ASEB/json (API)
NEWS

# Install 'ASEB' in R:
install.packages('ASEB', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • c++– GNU Standard C++ Library v3

On BioConductor:ASEB-1.57.0(bioc 3.24)ASEB-1.56.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

proteomicscpp

4.20 score 1 scripts 8 mentions 6 exports 0 dependencies

Last updated from:10138ac703 (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK, 4 WARNING. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR124
linux-devel-arm64NOTE150
linux-devel-x86_64NOTE170
source / vignettesOK153
linux-release-arm64NOTE112
linux-release-x86_64NOTE149
macos-release-arm64WARNING74
macos-release-x86_64WARNING214
macos-oldrel-arm64WARNING83
macos-oldrel-x86_64WARNING201
windows-develNOTE91
windows-releaseNOTE87
windows-oldrelNOTE84
wasm-releaseOK89

Exports:asebProteinsasebSitesdrawEScurvedrawStatreadSequenceSequenceInfo

Dependencies:

ASEB

Rendered fromASEB.Rnwusingutils::Sweaveon Jun 21 2026.

Last update: 2022-01-25
Started: 2013-11-01

Readme and manuals

Help Manual

Help pageTopics
prediction of all lysine sites on a specific protein that can be acetylatedasebProteins asebProteins,character,character,character-method asebProteins,SequenceInfo,SequenceInfo,SequenceInfo-method
prediction of lysine sites that can be acetylatedasebSites asebSites,character,character,character-method asebSites,SequenceInfo,SequenceInfo,SequenceInfo-method
draw Enriment Score curves for specific sitesdrawEScurve drawEScurve,data.frame-method
draw P-values and enrichment scores for all lysine sites on a specific proteindrawStat drawStat,data.frame-method
read sequences from filereadSequence
"SequenceInfo" classSequenceInfo