AW Fisher tutorial
Introduction | Background | Statistical method | About this tutorial | About the package | How to install the package | How to cite the package | Maintainer | Description about the example data -- multi-tissue mouse metabolism transcriptomic data | Read in the example data | Prepare the input p-value matrix -- perform differential expression analysis in each study | Perform AW Fisher meta analysis using the multi-tissue mouse metabolism transcriptomic data | Differential expression pattern (meta-pattern) detection. | Calculate dissimilarity matrix | Apply the tight clustering algorithm to get gene modules with unique meta-pattern | Visualize the heatmap of the first meta-pattern module for all three tissues.
Rendered fromAWFisher.Rmdusingknitr::knitr