Package: ExploreModelMatrix 1.24.0

Charlotte Soneson

ExploreModelMatrix: Graphical Exploration of Design Matrices

Given a sample data table and a design formula, ExploreModelMatrix generates an interactive application for exploration of the resulting design matrix. This can be helpful for interpreting model coefficients and constructing appropriate contrasts in (generalized) linear models. Static visualizations can also be generated.

Authors:Charlotte Soneson [aut, cre], Federico Marini [aut], Michael Love [aut], Florian Geier [aut], Michael Stadler [aut]

ExploreModelMatrix_1.24.0.tar.gz
ExploreModelMatrix_1.24.0.zip(r-4.7)ExploreModelMatrix_1.24.0.zip(r-4.6)ExploreModelMatrix_1.24.0.zip(r-4.5)
ExploreModelMatrix_1.24.0.tgz(r-4.6-any)ExploreModelMatrix_1.24.0.tgz(r-4.5-any)
ExploreModelMatrix_1.24.0.tar.gz(r-4.7-any)ExploreModelMatrix_1.24.0.tar.gz(r-4.6-any)
ExploreModelMatrix_1.24.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
ExploreModelMatrix/json (API)
NEWS

# Install 'ExploreModelMatrix' in R:
install.packages('ExploreModelMatrix', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/csoneson/exploremodelmatrix/issues

On BioConductor:ExploreModelMatrix-1.25.0(bioc 3.24)ExploreModelMatrix-1.24.0(bioc 3.23)

experimentaldesignregressiondifferentialexpressionshinyapps

8.21 score 38 stars 107 scripts 2 mentions 2 exports 72 dependencies

Last updated from:fe30945452 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE159
linux-devel-x86_64OK194
source / vignettesOK262
linux-release-x86_64OK225
macos-release-arm64OK102
macos-oldrel-arm64OK90
windows-develOK139
windows-releaseOK118
windows-oldrelOK124
wasm-releaseOK127

Exports:ExploreModelMatrixVisualizeDesign

Dependencies:base64encBiocGenericsbslibcachemclicommonmarkcowplotcpp11crosstalkdigestdplyrDTevaluatefarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlazyevallifecyclelimmamagrittrMASSmemoisemimeotelpillarpkgconfigpromisespurrrR6rappdirsRColorBrewerRcpprintrojsrlangrmarkdownS4VectorsS7sassscalesshinyshinydashboardshinyjssourcetoolsstatmodstringistringrtibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableyaml

Interactive exploration of design matrices with ExploreModelMatrix

Rendered fromExploreModelMatrix.Rmdusingknitr::rmarkdownon Jun 21 2026.

Last update: 2024-03-02
Started: 2020-03-27

Deploying ExploreModelMatrix on a Shiny Server

Rendered fromEMMdeploy.Rmdusingknitr::rmarkdownon Jun 21 2026.

Last update: 2020-06-14
Started: 2020-04-19

Readme and manuals

Help Manual

Help pageTopics
Explore model matrixExploreModelMatrix
Visualize design matrixVisualizeDesign