Package: SpectraQL 1.6.0

Johannes Rainer

SpectraQL: MassQL support for Spectra

The Mass Spec Query Language (MassQL) is a domain-specific language enabling to express a query and retrieve mass spectrometry (MS) data in a more natural and understandable way for MS users. It is inspired by SQL and is by design programming language agnostic. The SpectraQL package adds support for the MassQL query language to R, in particular to MS data represented by Spectra objects. Users can thus apply MassQL expressions to analyze and retrieve specific data from Spectra objects.

Authors:Johannes Rainer [aut, cre], Andrea Vicini [aut], Sebastian Gibb [ctb]

SpectraQL_1.6.0.tar.gz
SpectraQL_1.6.0.zip(r-4.7)SpectraQL_1.6.0.zip(r-4.6)SpectraQL_1.6.0.zip(r-4.5)
SpectraQL_1.6.0.tgz(r-4.6-any)SpectraQL_1.6.0.tgz(r-4.5-any)
SpectraQL_1.6.0.tar.gz(r-4.7-any)SpectraQL_1.6.0.tar.gz(r-4.6-any)
SpectraQL_1.6.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
SpectraQL/json (API)
NEWS

# Install 'SpectraQL' in R:
install.packages('SpectraQL', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/spectraql/issues

On BioConductor:SpectraQL-1.7.1(bioc 3.24)SpectraQL-1.6.0(bioc 3.23)

infrastructureproteomicsmassspectrometrymetabolomics

5.41 score 10 stars 13 scripts 240 downloads 1 exports 23 dependencies

Last updated from:32f9d0b630 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE162
linux-devel-x86_64OK241
source / vignettesOK243
linux-release-x86_64OK254
macos-release-arm64OK155
macos-oldrel-arm64OK159
windows-develOK171
windows-releaseOK159
windows-oldrelOK175
wasm-releaseOK140

Exports:query

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11data.tableformatRfsfutile.loggerfutile.optionsgenericsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsRcppS4VectorssnowSpectra

Mass Spec Query Language Support to the Spectra Package

Rendered fromSpectraQL.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2026-02-06
Started: 2022-01-19