Package: epivizrStandalone 1.40.0

Hector Corrada Bravo

epivizrStandalone: Run Epiviz Interactive Genomic Data Visualization App within R

This package imports the epiviz visualization JavaScript app for genomic data interactive visualization. The 'epivizrServer' package is used to provide a web server running completely within R. This standalone version allows to browse arbitrary genomes through genome annotations provided by Bioconductor packages.

Authors:Hector Corrada Bravo, Jayaram Kancherla

epivizrStandalone_1.40.0.tar.gz
epivizrStandalone_1.40.0.zip(r-4.7)epivizrStandalone_1.40.0.zip(r-4.6)epivizrStandalone_1.40.0.zip(r-4.5)
epivizrStandalone_1.40.0.tgz(r-4.6-any)epivizrStandalone_1.40.0.tgz(r-4.5-any)
epivizrStandalone_1.40.0.tar.gz(r-4.7-any)epivizrStandalone_1.40.0.tar.gz(r-4.6-any)
epivizrStandalone_1.40.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
epivizrStandalone/json (API)
NEWS

# Install 'epivizrStandalone' in R:
install.packages('epivizrStandalone', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:epivizrStandalone-1.41.0(bioc 3.24)epivizrStandalone-1.40.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

visualizationinfrastructuregui

3.48 score 5 scripts 338 downloads 3 exports 95 dependencies

Last updated from:00afc9a211 (on RELEASE_3_23). Checks:1 ERROR, 7 WARNING, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR292
linux-devel-x86_64WARNING510
source / vignettesOK370
linux-release-x86_64WARNING437
macos-release-arm64WARNING280
macos-oldrel-arm64WARNING390
windows-develWARNING386
windows-releaseWARNING399
windows-oldrelWARNING442
wasm-releaseOK243

Exports:setStandalonestartStandalonestartStandaloneApp

Dependencies:abindAnnotationDbiAnnotationFilteraskpassBHBiobaseBiocGenericsBiocIOBiocManagerBiocParallelBiostringsbitbit64bitopsblobbumphuntercachemcigarilloclicodetoolscpp11crayoncurlDBIDelayedArraydigestdoRNGensembldbepivizrepivizrDataepivizrServerfastmapforeachformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesgit2rgluegraphhttpuvhttrIRangesiteratorsjsonliteKEGGRESTlambda.rlaterlatticelazyevallifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslOrganismDbiotelpkgconfigpngpromisesProtGenericsR6RBGLRcppRCurlrestfulrRhtslibrjsonrlangrngtoolsRsamtoolsRSQLitertracklayerS4ArraysS4VectorsSeqinfosnowSparseArraystatmodSummarizedExperimentsysUCSC.utilsvctrsXMLXVectoryaml

Introduction to epivizrStandalone

Héctor Corrada Bravo

Rendered fromEpivizrStandalone.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2017-10-29
Started: 2016-05-02