Package: microRNA 1.70.0
"Michael Lawrence"
microRNA: Data and functions for dealing with microRNAs
Different data resources for microRNAs and some functions for manipulating them.
Authors:
microRNA_1.70.0.tar.gz
microRNA_1.70.0.zip(r-4.7-x86_64)microRNA_1.70.0.zip(r-4.6-x86_64)microRNA_1.70.0.zip(r-4.5-x86_64)
microRNA_1.70.0.tgz(r-4.6-x86_64)microRNA_1.70.0.tgz(r-4.6-arm64)microRNA_1.70.0.tgz(r-4.5-x86_64)microRNA_1.70.0.tgz(r-4.5-arm64)
microRNA_1.70.0.tar.gz(r-4.7-arm64)microRNA_1.70.0.tar.gz(r-4.7-x86_64)microRNA_1.70.0.tar.gz(r-4.6-arm64)microRNA_1.70.0.tar.gz(r-4.6-x86_64)
microRNA_1.70.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
microRNA/json (API)
| # Install 'microRNA' in R: |
| install.packages('microRNA', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:microRNA-1.71.0(bioc 3.24)microRNA-1.70.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
infrastructuregenomeannotationsequencematchingcpp
Last updated from:e201e6ce6b (on RELEASE_3_23). Checks:1 ERROR, 13 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 142 | ||
| linux-devel-arm64 | OK | 167 | ||
| linux-devel-x86_64 | OK | 179 | ||
| source / vignettes | OK | 171 | ||
| linux-release-arm64 | OK | 141 | ||
| linux-release-x86_64 | OK | 206 | ||
| macos-release-arm64 | OK | 180 | ||
| macos-release-x86_64 | OK | 242 | ||
| macos-oldrel-arm64 | OK | 144 | ||
| macos-oldrel-x86_64 | OK | 186 | ||
| windows-devel | OK | 124 | ||
| windows-release | OK | 111 | ||
| windows-oldrel | OK | 114 | ||
| wasm-release | OK | 104 |
Exports:get_selfhyb_subseqmatchSeedsRNA2DNAseedRegionsshow_selfhyb_countsshow_selfhyb_lengths
Dependencies:BiocGenericsBiostringscrayongenericsIRangesS4VectorsSeqinfoXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Get Self-Hybridizing Subsequences | get_selfhyb_subseq show_selfhyb_counts show_selfhyb_lengths |
| Human Mature microRNA Sequences | hsSeqs |
| Human microRNAs and their target IDs | hsTargets |
| A function to match seed regions to sequences. | matchSeeds |
| Mouse Mature microRNA Sequences | mmSeqs |
| Mouse microRNAs and their target IDs | mmTargets |
| A Function to translate RNA sequences into DNA sequences. | RNA2DNA |
| Test sequence data | s3utr |
| A function to retrieve the seed regions from microRNA sequences | seedRegions |
