Package: variants 1.36.0

Bioconductor Package Maintainer

variants: Annotating Genomic Variants

Read and write VCF files. Identify structural location of variants and compute amino acid coding changes for non-synonymous variants. Use SIFT and PolyPhen database packages to predict consequence of amino acid coding changes.

Authors:Valerie Obenchain [aut], Martin Morgan [ctb], Bioconductor Package Maintainer [cre]

variants_1.36.0.tar.gz
variants_1.36.0.zip(r-4.7-any)variants_1.36.0.zip(r-4.6-any)variants_1.36.0.zip(r-4.5-any)
variants_1.36.0.tgz(r-4.6-any)variants_1.36.0.tgz(r-4.5-any)
variants_1.36.0.tar.gz(r-4.7-any)variants_1.36.0.tar.gz(r-4.6-any)
variants_1.36.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
variants/json (API)

# Install 'variants' in R:

install.packages('variants', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologyworkflow annotationworkflow workflow

2.30 score 0 exports 74 dependencies

Last updated from:97d5b9ac31 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.
A new build is currently in progress.

Target	Result	Time
bioc-checks	NOTE	292
linux-devel	OK	418
source / vignettes	OK	404
linux-release	OK	429
macos-release	OK	241
macos-oldrel	OK	237
windows-devel	OK	253
windows-release	OK	263
windows-oldrel	OK	263
wasm-release	OK	240